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With it firmly glued, it appears that the bottom of the flange will sit about 1/4" above the floor. will this be too high? from the top of the flange to where the concrete will be is almost 3/4".
You do have a little "wiggle room" to work with here. If you'll notice there's a lip on the bowl that raises it up a bit. When that happens to me I make a dry run and place the bowl over the flange without a wax seal. If it's solid on the floor I set it but if it rocks I an faced with two options. 1) I can set the bowl and shim it so it doesn't rock **or** 2) I can re-do the flange.