The dip settings on remote and transmitter are set the same they're all up, but the manual says not to use this factory setting . What setting should I use

Any combination you use will work as long as the setting on the remote matches the setting on the receiver. Example: remote: switch 1 up, 2 up, 3 down, 4 up receiver: switch 1 up,2 up, 3 down, 4 up