The remote for my Honeywell ceiling fan stopped operating the fan and lights. I have checked to make sure the settings in the remote and fan body match. How do I check the proper connections?

If it worked before you can assume it was connected properly. Check for power reaching the incoming wires on the receiver in the canopy, check between black and white, if no power check between black and green, if no power go back to the wall switch box and check power there

Does the fan have pullchains?

My guess is this will end with contacting Honeywell for replacement parts.

No, the ceiling fan does not have pull chains.

Probably a bad receiver. Contact Honeywell for a replacement.

Ceiling fan remote controls - help and FAQ- Ceiling Fans N More