I invoice through one software program and track payments of each invoice under each client in that program but use Quickbooks Pro for everything else. I have been duplicating each invoice and payment in QBs but no longer want to do that. I want to record the total $$ amount invoiced each week to Quickbooks under my Income Account and post daily cash deposits against that total instead of double entering everything in both programs.

1. How do I record the weekly invoice Total in Qbs? I believe it is with a Journal Entry but unsure.
2. When I receive payments each day how do I enter them in QBs and set which bank account I deposited them too. I currently use Receive Payments under Customers but will not be applying to customers any longer.

Sorry if now explaining this well.

You would use a journal entry to Credit Sales and Debit Trade Debtors. When you receive funds you use the register function to debit the Bank Account/cash and Credit Trade Debtors