I don't remember what location you are in. There are R values for certain climates. Let us know about that, and we can help you.
Since you are not going to the outside, wrapping the stud framing surround the window won't work so well. Sorry, I had in my head that you had damage on the outside surround the window.
Get a dehumidifier in that room to help get that dampness out. A fan is helpful too - heading out the direction of a window, but back enough for circulation at the damp area.
Before you paint/ or do any rebuilding - everything has to be very dry. This is where overdoing it is applied. Because water will wick into wood and other material, the outside may feel dry, but there still may be some moisture inside of that material.
It's location has it's own code for where to put the vapor barrier and insulation, and that usually correlates with location/code and climate.
You are right to replace any wet insulation.
You will may want to have your window sill wraped with coated alumin. If you don't have the tools to wrap and bend, it can be a bit difficult, but it's doable. Yes, leaving holes at the bottom slant going to the ext. is important, but you have that already covered.
one the sill has the alumin. Sheeting installed, you should only then caulk the sides of the sill and any area that has an opening to the inside of the window sill. The bottom underside where the sill protrudes out it connects to the siding so that water and cold can't penetrate at that point.
The storm is then left clear of caulking at the bottom so that water can get out. Whether that water is from a device, or from rain/snow.
If you air conditioner leaked into the sill even at a slant, then there could many possibilities for that. The first place I would check is where it is suppose to drain. That area get's clogged by debris and the air conditioner will fill up with water from condensation. I like putting an air conditioner on a platform within a window.
Working today, so will check tonight. Good luck!