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I think it might be a Russian movie called NightWatch. Great film by the way.

The movie is called Why Me? Here is a link with more info.

Why Me? (1984) (TV)

Pirates of Dark Water is a good guess. In episode #9 called Panacea, there is a furry-fish like talking creature in a glass type jar thing. No wings now, but later, near the end of the story, he...

I believe it was a show called Reboot. Great show by the way.

YouTube - ReBoot - Season 4 Alternate Opening (Story Arc 2)

There were several seasons with different opening scenes. Here's one of...

The movie is called Fire With Fire. Very hard to find on VHS or DVD. Sometimes it is run on cable TV.

Fire with Fire - Wikipedia, the free encyclopedia

Fire with Fire (1986)

Arabian Knights is an animated segment of The Banana Splits Adventure Hour, created by Hanna-Barbera Productions. The series is based on Arabian Nights, a classic work of Middle Eastern literature....

It could be an anime movie called Warriors of the Wind (American title) or Nausicaa of the Valley of the Wind (Japan and Euro title). Same movie, two slightly different versions, different voice...

You never said if it were drawn animation or computer CGI. If CGI, then I would suggest Reboot or War Planets.

YouTube - ReBoot - Season 4 Alternate Opening (Story Arc 2)

YouTube - Shadow...

Have you tried Disney's Beauty and The Beast ? Not sure if its what you saw, but it has a stained glass window with a rose.

This could be the movie Cold Creek Manor.

Cold Creek Manor - Wikipedia, the free encyclopedia

Cold Creek Manor (2003) - Plot Summary

It could be the movie At The Earth's Core.

At the Earth's Core (1976)

Aliens? Spaceships? Watch 4400 again. (SPOILER ALERT, DO NOT READ IF YOU HAVEN'T SEEN THE SERIES.) No aliens, no ships, it was people from the future remember? They took people from the past and...

There is a more modern movie called The Triangle. One of its many plots involves a little girl who survives a plane crash in the Bermuda Triangle. She survives in an airtight room of the plane. But...

The main antagonist of the movie The Last Unicorn is The Red Bull. A huge bull monster, bright red, that breathes fire, but there is no brother and sister in this film.

I think StarBlazers as well. Check out intro on YouTube:

YouTube - Star Blazers Theme (English Version)

Try the movie MirrorMask.

MIRRORMASK is the story of Helena, who works for the family circus, and wishes--quite ironically--that she could run away and join real life. But such is not to be the...

That is the plot from the movie The Neverending Story II : The Next Chapter.

Quote from Wikipedia: "... The sorceress has a sinister plan for Fantasia and the Childlike Empress, but much of the...

I think it could be the movie The Visitation. Here's a description from Amazon and a link;

The true face of terror is revealed in this supernatural thriller based on Frank Peretti’s best-selling...

Oh yes, I am sure Titan AE is the movie you are thinking about. You can find it very cheap in any retail store. I have seen it for under $5.00. Or you can buy it or download it from Amazon for a few...

War Planets but also called Shadow Raiders The series is set in a five-planet solar solar system known as the Cluster. The four habitable planets are in a constant state of war, always raiding...

It could be Titan A.E.

The Worst Witch It was a British television series about a group of young witches at a Magic Academy. The main character was Mildred Hubble who was called the "Worst Witch" because she's always...

I too am a DVD addict. Here are just a few series titles I picked up, watched and loved.

Carnivale. An HBO series taking place in the 1930's during the dust bowl / great depression era. It is...

Prince Planet. A great classic show. It features some really old Japanese animation, before they really became skilled, but still, Prince Planet is right up there with Astro Boy. Here's a peek at the...

There was a movie called Shrieker, about some college kids living illeagally in a building. One, gets a weird slip of paper with some occult markings on it. The paper is a curse and will summon a...

Sadly I am unsure about this one, but many of what you describe sounds VERY much like the plot and style to The Highlander movies and TV series.
A race of Immortals who heal very fast, are hunting...

Not sure about this one but could it be a movie called Tie Me Up, Tie Me Down..

I actually remember this well and I DON'T think it was a movie. It is an episode of the classic Twilight Zone called The Howling Man.

Wikipedia describes the whole plot:

The story is told in...

Hmmm? It might be Family Dog, a short run primetime cartoon series on CBS.

YouTube - Family Dog - Intro

http://en.wikipedia.org/wiki/Family_Dog_(TV_series)

Here are some links.

Hey, you didn't miss much. Heroes has really been crap these last few seasons.

Not sure about a book, but there was a movie with that same plot. It was called Goliath Awaits.

Goliath Awaits (1981) (TV)

I think the movie is called Date With An Angel. Warning... SPOILER ALERT: In this movie, an aspiring (poor) composer, who is engaged to a real rich spoiled brat, meets... an angel. She falls to Earth...

Happy to help. Good luck.

Sadly its very hard to find. I don't even think a DVD is available. I checked Amazon.com and only found a VHS copy. Good luck.

Amazon.com: Sea Prince & Fire Child [Animated] (Shiriusu no densetsu...

It was called The Sea Prince and the Fire Child.

There is a Twilight Zone episode about a blonde woman who is driving and gets in an accident, but seems unhurt. Later a strange hitch-hiker keeps following her. Turns out that she is really dead the...

Okay, do me a favor and check out Heavy Metal again. I know you you said you already looked, but... many people make the same mistakes with Heavy Metal. The first mistake is that they watch Heavy...

Update: The Wikipedia link I gave is not working. So instead try typing Space Rangers TV Series into the Wikipedia search box.

It was a great series and sadly very short lived. It was called Space Rangers and it came out around 1993. I watched every episode. Here is a YouTube link to watch the opening and a Wikipedia link...

I agree with faylanskye, Lexx is correct, but don't forget, the original movies, before the series was made, were not called Lexx. They were called Tales From a Parallel Universe.

Could be the plot of the movie called The Night Listener. In this movie, an abused kid writes a tell all book about his past abuse. Everyone in town raves about the kid. He even call a radio celeb...

Lord of The Flies. Here's an Amazon DVD link.

Amazon.com: Lord of the Flies: Balthazar Getty, Chris Furrh, Danuel Pipoly, James Badge Dale, Andrew Taft, Edward Taft, Gary Rule, Terry Wells,...

Super Force. Here's a so so YouTube clip.

YouTube - Super Force theme

The Pirates of Dark Water. Here's a YouTube link.

YouTube - Pirates of the Dark water intro

Gem_22205 is right, it is The Two Worlds of Jenny Logan. Sadly it is NOT available on DVD. But... there are a few bootleg DVD copies out there for sale. Too bad this will be the only way to enjoy...

Sorry but in EVERY Indiana Jones movie, Indy is warned not to go any further looking for the ancient "whatever it is." Raiders of the Lost Ark, The Last Crusade, and Kingdom of the Crystal Skull all...

It was a show called Dai X. Here is a you tube link.

YouTube - Dai X Junction and Battle from Star Fleet

Yeah, I found it on Amazon for between $27 and $35. Its so expensive because the studio released it as a limited run, so only a few copies are floating out there. Not like a more modern popular movie...

Yes, it sounds very much like the plot to Lensman (which is hard to find on DVD or VHS).

I know this movie well, it was called The Quest, and starred Henry Thomas. Here is an Amazon link with plot description.

Amazon.com: The Quest [VHS]: Henry Thomas, Tony Barry, Rachel Friend,...